BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB013A06LP1|AL426449
(860 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1669 1686 0.0
>3x_Contig1669
Length = 15503
Score = 1686 bits (849), Expect = 0.0
Identities = 856/860 (99%)
Strand = Plus / Plus
Query: 1 gtcaccaccgtcttcagcagatgggttggcaccgatatcgatgttgtcaccaccaacctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2428 gtcaccaccgtcttcagcagatgggttggcaccgatatcgatgttgtcaccaccaacctt 2487
Query: 61 gaccatgtcacagtcagcttcgtaaatgacaccgtcaaccaacttcaagtcgtaggcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2488 gaccatgtcacagtcagcttcgtaaatgacaccgtcaaccaacttcaagtcgtaggcatc 2547
Query: 121 ggacaatagttcgtcaccagagataatatcagtgtaaatgatcatgttgctattgtatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2548 ggacaatagttcgtcaccagagataatatcagtgtaaatgatcatgttgctattgtatca 2607
Query: 181 gggatcgattgatgttctcttcacgggatgtaagataaagctaaactaaactaaaactaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2608 gggatcgattgatgttctcttcacgggatgtaagataaagctaaactaaactaaaactaa 2667
Query: 241 attaaatcaactatccaaaaagattacaaaacaatcattacaaagaataaatattcaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2668 attaaatcaactatccaaaaagattacaaaacaatcattacaaagaataaatattcaaag 2727
Query: 301 gaaataaataacatcatgcactaaaatgtaatttaaaaccaagaagaaatacctctaaac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2728 gaaataaataacatcatgcactaaaatgtaatttaaaaccaagaagaaatacctctaaac 2787
Query: 361 aatgaaaagaattaattttatcttgatatccaatgttcatcatgtgcatcgaatttccat 420
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2788 aatgaaaagaattaattntatcttgatatccaatgttcatcatgtgcatcgaatttccat 2847
Query: 421 cctttatataaaccttcctttgaacaggaaaaccttgaacaaaaagaaaaaaaaattttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2848 cctttatataaaccttcctttgaacaggaaaaccttgaacaaaaagaaaaaaaaattttt 2907
Query: 481 cacttcgcttctgtaaaagaaaaaatcacggcgatgagctgtagaagtgggaaaragcaa 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 2908 cacttcgcttctgtaaaagaaaaaatcacggcgatgagctgtagaagtgggaaaaagcaa 2967
Query: 541 ttatccgtacaccacacaataaattcaagcatcacgtgaatgggctaactgcatgcattt 600
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 2968 ttatccgtacaccacacaataaattcaagcatcacgtgaattggctaactgcatgcattt 3027
Query: 601 ccctttatataggctcgtaaactgctacactcgcatttatattcagtttatgckaggttt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 3028 ccctttatataggctcgtaaactgctacactcgcatttatattcagtttatgctaggttt 3087
Query: 661 ttaagccccatcgcagctattatcccgtttacagacgtcaattcaccgttcggtaacttt 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3088 ttaagccccatcgcagctattatcccgtttacagacgtcaattcaccgttcggtaacttt 3147
Query: 721 tctcgcagtttctgttgtatttctgggtctaatgtcttgatcatatctgtactttcgaca 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3148 tctcgcagtttctgttgtatttctgggtctaatgtcttgatcatatctgtactttcgaca 3207
Query: 781 agccccggtgatatggtctggacgtcaatgctcaatcgtttcaattcttccgataggacg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3208 agccccggtgatatggtctggacgtcaatgctcaatcgtttcaattcttccgataggacg 3267
Query: 841 cggttatattggatcattgc 860
||||||||||||||||||||
Sbjct: 3268 cggttatattggatcattgc 3287
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8979
Number of Sequences: 1807
Number of extensions: 8979
Number of successful extensions: 129
Number of sequences better than 1.0e-20: 1
length of query: 860
length of database: 10,358,551
effective HSP length: 16
effective length of query: 844
effective length of database: 10,329,639
effective search space: 8718215316
effective search space used: 8718215316
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)